<Required Header Information>

To:         star@nmdp.org

Subject:    NMDP LBSW TRANSACTIONS

 

<Required Message Format>

CL1_AGS TRANSACTION:

         1    +    2    +    3    +    4    +    5    +    6    +    7    +    8

12345678901234567890123456789012345678901234567890123456789012345678901234567890

LBSWCL1_AGS999999999999999CCYYMMDDIXXXXXXXXXXXXIXXXXXXXXXXXXIXXXXXXXXXXXXIXXXXXX

A   B      C  D  E        F       G            H            I            J 

|   |      |  |  |        |       |            |            |            |

L  TRAN   LAB CC ID     DATE      A Locus      B Locus      Bpu          Cw Locus

 

                   1

8   +    9    +    1

12345678901234567890

XXXXXX99999999999999..

      |

      K

      PROBE SCORES..      

                  

A.       Record Type Indicator - "LBSW" for Lab Software Data

B.      Transaction Type

C.      Lab Code

D.      Center Code (e.g. TC, DC, Cord Blood Bank)

E.    NMDP_ID (Donor ID/CBU ID - 9 digit max - leading zeroes and numeric chars only, no dashes)

F.       Date Sample Processed - "CCYYMMDD" (e.g 19971221 is Dec 21 1997)

G.      *A Locus

H.      *B Locus

I.         *Bpu (B Public Serology)

J.       *Cw Locus

K.      PROBE Data Scores

 

* where "Locus" looks like this:

IXXXXXXXXXXXX

ab     c     

a. DNA/Serological Indicator: D=DNA, S=SEROLOGICAL

b. First antigen "XXXXXX" (including silent mutation)

c. Second antigen "XXXXXX" (including silent mutation)

 

LOCUS STRING TABLE

Description

Allele 1

SM 1

 

Allele 2

SM 2

Locus String

Reported

4 character

Allele Code

01ABCD

blank

02ABCD

blank

XXXXXXXXXXXX 01ABCD02ABCD

3 character

Allele Code

01ABC

blank

02ABC

blank

XXXXXXXXXXXX 01ABC 02ABC

 01ABC 02ABC

2 character

Allele Code

01AB

blank

02AB

blank

XXXXXXXXXXXX 01AB  02AB

 01AB  02AB

  01AB  02AB

Allele with/SM

0101

6

or

06

0201

7

or

07

XXXXXXXXXXXX 01016 02017

 01016 02017

0101 60201 7

010106020107

Allele without/SM

0101

blank

0201

blank

XXXXXXXXXXXX

0101  0201

 0101  0201

  0101  0201

                                                                                                                                                           

CL2_AGS TRANSACTION(same message):

         1    +    2    +    3    +    4    +    5    +    6    +    7    +    8

12345678901234567890123456789012345678901234567890123456789012345678901234567890

LBSWCL2_AGS999999999999999CCYYMMDDIXXXXXXXXXXXXIXXXXXXXXXXXXIXXXXXXXXXXXXIXXXXXX

A   B      C  D  E        F       G            H            I            J 

|   |      |  |  |        |       |            |            |            |

L  TRAN   LAB CC ID       DATE    DRB1         DRB3         DRB4         DRB5

 

                   1         1         1         1         1         1         1      

    +    9    +    0    +    1    +    2    +    3    +    4    +    5    +    6

12345678901234567890123456789012345678901234567890123456789012345678901234567890

XXXXXXIXXXXXXXXXXXXIXXXXXXXXXXXXIXXXXXXXXXXXXIXXXXXXXXXXXX999999999999..

      K            L            M            N            O

      |            |            |            |            |

      DPA1         DPB1         DQA1         DQB1         PROBES..

                  

A.       Record Type Indicator - "LBSW" for Lab Software Data

B.      Transaction Type

C.      Lab Code

D.      Center Code (e.g. TC, DC, Cord Blood Bank)

E.    NMDP_ID (Donor ID/CBU ID - 9 digit max - leading zeroes and numeric chars only, no dashes)

F.       Date Sample Processed - "CCYYMMDD"

G.      *DRB1 Locus

H.      *DRB3 Locus

I.         *DRB4 Locus

J.       *DRB5 Locus

K.      *DPA1 Locus

L.       *DPB1 Locus

M.      *DQA1 Locus

N.      *DQB1 Locus

O.      PROBE Data Scores

 

* where "Locus" looks like this:

IXXXXXXXXXXXX

ab     c    

a.    DNA/Serological Indicator: D=DNA, S=SEROLOGICAL

b.       First antigen "XXXXXX" (including silent mutation)

c.       Second antigen "XXXXXX" (including silent mutation)

 

LOCUS STRING TABLE

Description

Allele 1

SM 1

 

Allele 2

SM 2

Locus String

Reported

4 character

Allele Code

01ABCD

blank

02ABCD

blank

XXXXXXXXXXXX 01ABCD02ABCD

3 character

Allele Code

01ABC

Blank

02ABC

blank

XXXXXXXXXXXX 01ABC 02ABC

 01ABC 02ABC

2 character

Allele Code

01AB

Blank

02AB

blank

XXXXXXXXXXXX 01AB  02AB

 01AB  02AB

  01AB  02AB

Allele with/SM

0101

6

or

06

0201

7

or

07

XXXXXXXXXXXX 01016 02017

 01016 02017

0101 60201 7

010106020107

Allele without/SM

0101

Blank

0201

blank

XXXXXXXXXXXX

0101  0201

 0101  0201

  0101  0201

                                                                                        

NEW NMDP LBSW MESSAGE FORMAT

 

DATE:         FRI NOV 08, 1996 11:10 AM CST

FROM:         NMDP CONTRACT LABORATORY <TECH@LAB.COM>

TO:           NMDP REGISTRY <STAR@NMDP.ORG>

SUBJECT:      NMDP LBSW TRANSACTION

MESSAGE-ID:   12345678901234/00044445522PK3EM

 

LBSWCL1_AGS65005898765432119970315D01ABC 02ABC D03ABC…81111111118888888888..

LBSWCL1_AGS65005898765432119970315D 01016 02017D03ABC…81111111118888888888..

…

LBSWCL2_AGS65005812345678919970315D01ABC 02ABC D03ABC…81111111118888888888..

LBSWCL2_AGS65005812345678919970315D 01016 02017D03ABC…81111111118888888888..

..

..

(class I Standard probe names start here)

GAGEN

2A9F-S11

2A11S11

2A9T-S11

..

..

GBGEN

2B13T13

2B9T-F11

..

..

(class I  Primer pair and group specific probe names start here)

GA123

GA1232A9F-S11

GA1232A11S11

..

..

GB456

GB4562B13T13

GB4562B9T-F11

..

..

(class II Standard generic probe names start here)

GDRGEN

R9EEV11

R9EL-11

R9E-V-H13

..

..

(class II Primer pair and group specific probe names start here)

GDR356

GDR356R26FD-Y30

GDR356R26Y-D-Y30

..

..

 

Note: The number of columns in the probe scores must match the number of rows of probes and primer names at the bottom of the message.  The probe scores will be interpreted as corresponding to the probe names listed at the bottom of the message in the same order.